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Structure, Dynamics and Function of Biomolecules : The First EBSA Workshop A Marcus Wallenberg Symposium

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概要 This is a collection of papers presented and discussed at the first EBSA workshop held at Saltsj6baden outside stockholm in Sweden, July 6-10, 1986. The common theme of these papers is dynamics of bio...molecules, and how the dynamics depends on the molecular structure and organi zation, and connects to and determines the biological function. This is a rapidly expanding field of research which combines many different aspects of molecular bio physics. Much material is new and presented for the first time. Even if the work so far has been of the kind that is usually called basic research, practical applications are clearly indicated in some articles, and are waiting around the corner in several other cases. At the workshop only one third of the time was used for the formal presentations and two thirds for discussion. To this should also be added discussions during the poster sessions. During these lively and unrecorded discussions fresh viewpoints emerged and new ideas were created. Ad mittedly, our knowledge at present is only fragmentary but when pieces of the puzzle are brought together at a workshop or in a publication of this kind more extended and sometimes unexpected contours and shapes become vi sible. It is our hope that this rapid publication of camera-ready manuscripts will transfer some of the spi rit at the workshop to the reader, and in his or her institute or laboratory initiate further discussions, bring forward more ideas and start new experimental ap roaches.続きを見る
目次 Section I. Introductory Keynotes
The Nature of Mechanical Devices in Biological Systems
Physical Chemistry and Biological Strategy of Antigen Recognition
Section II. Structure and Dynamics of Heme Proteins
Heme Protein Reactions: Models, Concepts, and Problems
Multiple Conformational States of Myoglobin: A Molecular Dynamics Analysis
Dynamics of Structural Changes in Hemoglobin
Structure and Dynamics of Photodissociated Myoglobin
Structural Fluctuations in Myoglobin
Glass Transition of Hydration Water and Structural Flexibility of Myoglobin
Pressure Studies of Large-Scale Protein Motions
Viscosity and Glycerol Effects on Dynamics of Cytochrome c
Kinetics of Geminate Recombination Following Photodissociation of Mutant (Carbonmonoxy) Hemoglobins
Section III. Physical Aspects of Biomolecular Dynamics and Kinetics
Thermodynamics of Enzyme Folding and Activity: Theory and Experiment
Progress and Problems in the Study of Protein Dynamics by X-Ray Diffraction
Activation Free Energies of Enzymatic Reactions; Simulations and Experiments
Simple Models for the Dynamics of Biomolecules: How Far Can We Go?
Condensed Matter Biophysics: Structure and Dynamics of Large Biomolecules
Molecular Dynamics Simulation of Parvalbumin in Aqueous Solution
Cooperative Ion Binding to Proteins. A Statistical Mechanical Approach
Single Step Kinetics of Enzyme Dynamics
Low Frequency Dynamics of BPTI Studied by Inelastic Neutron Scattering
Trans-Cis Isomerizations in Biology
Section IV. Determination of Biomolecular Structure and Dynamics in Solution
A NMR View of Proteins in Solution
Determination of 3D-Structures of Macromolecules by Restrained Molecular Dynamics on the Basis of Interproton Distances
The Structure of the tRNA Anticodon Arm as Determined by Restrained Molecular Dynamics in Combination with NMR Interproton Distance Data
Solving Solution Structural Problems by Combining 2-D NMR Data with Known Substructures from a Protein Database
Molecular Graphics and Molecular Dynamics
Study of the Dynamics of Hydrated Proteins and Protein-Bound Water by Rayleigh Scattering of Mössbauer Radiation (RSMR)
Fluorescence Lifetime Distributions of Single Tryptophan Proteins: A Protein Dynamics Approach
Time Domain Spectroscopy of Molecular Dynamics
Detection of Time-Resolved Microsecond Molecular Dynamics by Optical and Magnetic Resonance Spectroscopy
Linear Dichroism - A Potential Method for Studying DNA-Protein Interaction
Section V. Experimental Studies of Protein Dynamics and Kinetics
Microtubule Structure and Assembly Studied by Time-Resolved X-Ray Scattering and Cryo-Electron Microscopy
Polymerisation of Fibrinogen to Fibrin Studied by Time-Resolved Small Angle Neutron Scattering
Internal Dynamics of Aromatic Residues in Subtilisin BPN' and Subtilisin Carlsberg: Time-Resolved Fluorescence Properties
Time-Resolved Fluorescence Anisotropy Decay Studies in Proteins
Study of Single Cycles of the Direct and Back Enzyme Reactions Catalyzed by Malatedehydrogenase
Dynamics of Iron in Ferritin
Structure, Dynamics and Function of Serine Proteases
Section VI. Proton and Energy Transfer
Intramolecular Proton Transfer in Bacteriorhodopsin (bR)
ATP Synthesis by the Membrane Bound and Isolated H+ ATPases After Jump-Like pH Increase
Structural Aspects on Energy Transfer in Light Harvesting Complexes
Section VII. Nucleic Acid Dynamics
Imino-Proton Exchange and Base-Pair Kinetics of Nucleic Acids
NMR and Time Resolved Fluorescence Studies of a 2-Aminopurine Substituted Eco RI Restriction Site
Local Flexibility in Recognition Processes Between Macromolecules
Conformational Aspects of Hairpin Loops in DNA Oligonucleotides
The Cruciform Extrusion Transition in Supercoiled DNA Molecules
Left-Handed DNA: Energetic and Dynamic Aspects
Z-DNA Dynamic Structure: A Hydrogen Exchange Study
Induction of the Z Conformation in DNAs Studied by I.R. Spectroscopy
The B ? Z Transition in Poly[d(G-C)·d(G-C)] After Covalent Binding of Anti-Benzo(a)Pyrenediolepoxide
Effects of Hydration on the DNA Base Motion
Structure and Dynamics of DNA and DNA-Adduct Complexes Studied with Polarized Light Spectroscopy
Calculation of Electrostatic Interactions Between Hexagonally Oriented DNA-Molecules
Section VIII. Nucleic Acid-Protein Interactions
Structure of the DNA-EcoRI Endonuclease Recognition Complex
Ribonuclease T1: Interaction with 2'GMP and 3'GMP as Studied by Time-Resolved Fluorescence Spectroscopy
Ultrasonic Absorption Evidence for Enhanced Volume Fluctuations in the Tobacco-Mosaic-Virus-Protein Helical Aggregate
3-D Image Reconstruction of a Specific Premessenger RNP Particle
Section IX. Membranes and Membrane Proteins
Molecular Dynamics of a Bilayer Membrane with Atomic Detail
Time-Resolved X-Ray Diffraction on Lipid Bilayer Interactions Using Synchrotron Radiation
Molecular Dynamics Studies of Model Membranes with Alfa Helices
Orientational Fluctuations of Melittin in Lipid Membranes as Detected by Time-Resolved Fluorescence Anisotropy Measurements
Structure Predictions for Membrane Proteins
The Temperature Peaks of Cell Membrane Permeability.
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登録日 2020.06.27
更新日 2020.06.28