Complete Nucleotide Sequences of RNA3s of Cucumber Mosaic Virus KM and D8 Strains - Collections

＜departmental bulletin paper＞
Complete Nucleotide Sequences of RNA3s of Cucumber Mosaic Virus KM and D8 Strains

Creator	Author PID K001638 Creator Name Takeshita, Minoru 竹下, 稔 Affiliation Affiliation Name Laboratory of Plant Pathology, Faculty of Agriculture, Kyushu University 九州大学農学部農学科植物病理学講座
Creator	Creator Name Takanami, Yoichi 髙浪, 洋一 Affiliation Affiliation Name Laboratory of Plant Pathology, Faculty of Agriculture, Kyushu University 九州大学農学部農学科植物病理学講座
Language	English
Publisher	Kyushu University
Publisher	九州大学農学部
Date	1997-12
Source Title	Journal of the Faculty of Agriculture, Kyushu University
Vol	42
Issue	1/2
First Page	27
Last Page	32
Publication Type	Version of Record
Access Rights	open access
Crossref DOI	https://doi.org/10.5109/24187
Related DOI	九州大学農学部紀要 \|\| 42(1/2) \|\| p27-32
	Journal of the Faculty of Agriculture, Kyushu University \|\| 42(1/2) \|\| p27-32
	http://www.agr.kyushu-u.ac.jp/
Related URI	九州大学農学部紀要 \|\| 42(1/2) \|\| p27-32
	Journal of the Faculty of Agriculture, Kyushu University \|\| 42(1/2) \|\| p27-32
	http://www.agr.kyushu-u.ac.jp/
Relation	九州大学農学部紀要 \|\| 42(1/2) \|\| p27-32
	Journal of the Faculty of Agriculture, Kyushu University \|\| 42(1/2) \|\| p27-32
	http://www.agr.kyushu-u.ac.jp/

File	FileType	Size	Views	Description
p027	pdf	272 KB	553

PISSN	0023-6152
NCID	AA00697606
Record ID	24187
Peer-Reviewed	Unrefereed
Subject Terms	Cucumber mosaic virus (CMV)
	Nucleotide sequence
	Sequence similarity
ISSN	0023-6152
NCID	AA00697606
Notes	Full-length eDNA clones of RNA3s of cucumber mosaic virus KM and DS strain (CMV-KM and CMV-DS) were synthesized and their complete nucleotide sequences were determined. CMV-KM and CMV:DS RNA3 consisted of 2210 and 2218 nucleotides, respectively, and contained predicted two open reading frames of 3a movement protein (MP) and coat protein (CP). Higher sequence similarities were observed at the nucleotide level between CMV-KM and CMV-Y (96%), CMV-KM and CMV-DS (96%), and CMV-DS and CMV-Y (97%), respectively, whereas lower similarities were found between CMV-KM and CMV-Q (76%), and CMV-DS and CMV-Q(75%}, respectively. Furthermore, there were almost complete sequence similarities (more than 97%) at the amino acid level among the MP (or CP) genes of CMV-KM, CMV-Y and CMV-DS. By contrast, lower amino acid sequence similarities were observed between the MP (or CP) genes of CMV-KM and CMV-Q (S3%), and CMV-DS and CMV-Q (S2%), respectively. These results strongly suggested that both CMV-KM and CMV-DS strains belong to Subgroup I in which CMV-Y is included.
Created Date	2012.08.01
Modified Date	2022.11.11